Motif View

Internal ID 17676608
Source Database TransTermHP TERM 45
Feature Type terminator
Name
Rho-independent transcription terminator TERM 45
Sequence GACGGGCCCGGACGACTTGGGGCCCGTC
Look for more occurrences
Start 245860
End 245887
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa DK2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTCGGCAAAAAAAAT(5' tail) GACGGGCCCCAA(5' stem) GTCG(loop) TCCGGGCCCGTC(3' stem) GGGTCAAAGCGCTGA(3' tail). Confidence: 95. overlap 245859

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685