Motif View

Internal ID 17677227
Source Database TransTermHP TERM 1066
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1066
Sequence GGCCCGCTGAGCAGCGGGCC
Look for more occurrences
Start 4418885
End 4418904
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa DK2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCCGGCATCCGAA(5' tail) GGCCCGCT(5' stem) GAGC(loop) AGCGGGCC(3' stem) TTTTCGTTGGCGCGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685