Motif View

Internal ID 17677858
Source Database TransTermHP TERM 387
Feature Type terminator
Name
Rho-independent transcription terminator TERM 387
Sequence CCGGGGCCTGGTGCCCCGG
Look for more occurrences
Start 1700678
End 1700696
Strand +
Genomic Context
Replicon Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGTGCATGGAAG(5' tail) CCGGGGC(5' stem) CTGGT(loop) GCCCCGG(3' stem) TTTTTCTTTTTTGTC(3' tail). Confidence: 100. opp_overlap 1700677

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685