Motif View

Internal ID 17678180
Source Database TransTermHP TERM 925
Feature Type terminator
Name
Rho-independent transcription terminator TERM 925
Sequence CCCCGCTTCGGCGGGG
Look for more occurrences
Start 4106408
End 4106423
Strand -
Genomic Context
Replicon Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCAGAAAAGAAAAA(5' tail) CCCCGC(5' stem) CGAA(loop) GCGGGG(3' stem) CTCTGCAGACTGAAT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685