Motif View

Internal ID 17678816
Source Database TransTermHP TERM 941
Feature Type terminator
Name
Rho-independent transcription terminator TERM 941
Sequence GCTGACGCAGGCCGCAGAATGCAACCTGCGTCACGC
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Start 4363285
End 4363320
Strand -
Genomic Context Located within gene [PSTAA_4064]
Replicon Pseudomonas stutzeri DSM 4166 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAAACGCAATACAAA(5' tail) GCGTGACGCAGGTTGCA(5' stem) TTC(loop) TGCGGCCTGCGTCA-GC(3' stem) CGCGAGAAGCCTTGC(3' tail). Confidence: 95. gap 1

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685