Motif View

Internal ID 17679565
Source Database TransTermHP TERM 75
Feature Type terminator
Name
Rho-independent transcription terminator TERM 75
Sequence CGCCGCCCGAGGGCGGCG
Look for more occurrences
Start 377053
End 377070
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGATGAAACGAAAA(5' tail) CGCCGCC(5' stem) CGAG(loop) GGCGGCG(3' stem) TTTTGCGTTACGGCC(3' tail). Confidence: 100. opp_overlap 377047 377053

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685