Motif View

Internal ID 17679701
Source Database TransTermHP TERM 304
Feature Type terminator
Name
Rho-independent transcription terminator TERM 304
Sequence CGGGGCGGCTGTGTCGCCCCG
Look for more occurrences
Start 1451474
End 1451494
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGGCCTGATTTCCT(5' tail) CGGGGCGGC(5' stem) TGT(loop) GTCGCCCCG(3' stem) TTTTTCCAGACAGAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685