Motif View

Internal ID 17679748
Source Database TransTermHP TERM 373
Feature Type terminator
Name
Rho-independent transcription terminator TERM 373
Sequence GGCGAGCTGATCAGCTCGCC
Look for more occurrences
Start 1719758
End 1719777
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTAGCAGAAAGAAAA(5' tail) GGCGAGCT(5' stem) GATC(loop) AGCTCGCC(3' stem) TTTTTTGTATCTGCC(3' tail). Confidence: 100. opp_overlap 1719758 1719753

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685