Motif View

Internal ID 17679796
Source Database TransTermHP TERM 452
Feature Type terminator
Name
Rho-independent transcription terminator TERM 452
Sequence GGTGCCCCGCCTGTCGCGGGGCACC
Look for more occurrences
Start 2282470
End 2282494
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGAATGACGGCCAAC(5' tail) GGTGCCCCGC(5' stem) CTGTC(loop) GCGGGGCACC(3' stem) TTCATGTCGTGCGGG(3' tail). Confidence: 100. opp_overlap 2282462

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685