Motif View

Internal ID 17679988
Source Database TransTermHP TERM 764
Feature Type terminator
Name
Rho-independent transcription terminator TERM 764
Sequence CAAACCCCCGATCCTCGAAAGAAGGTCGGGGGTTTG
Look for more occurrences
Start 3691858
End 3691893
Strand -
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCTTCCACGCAAAGA(5' tail) CAAACCCCCGACCTTC(5' stem) TTTC(loop) GAGGATCGGGGGTTTG(3' stem) GTGTAGAAGCTTGAC(3' tail). Confidence: 100. opp_overlap 3691862, overlap 3691862

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685