Motif View

Internal ID 17681064
Source Database TransTermHP TERM 307
Feature Type terminator
Name
Rho-independent transcription terminator TERM 307
Sequence GCCGCTGCCGATCAGCGGC
Look for more occurrences
Start 1016425
End 1016443
Strand -
Genomic Context
Replicon Pseudomonas putida HB3267, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAGCACATAAAAAAA(5' tail) GCCGCTG(5' stem) ATCGG(loop) CAGCGGC(3' stem) TTTAAAAGGCTAACA(3' tail). Confidence: 100. opp_overlap 1016425

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685