Motif View

Internal ID 17682939
Source Database TransTermHP TERM 269
Feature Type terminator
Name
Rho-independent transcription terminator TERM 269
Sequence GCCCGCGTAATTGCGGGC
Look for more occurrences
Start 1260204
End 1260221
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa B136-33, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTAAAACACCTCTAA(5' tail) GCCCGCG(5' stem) TAAT(loop) TGCGGGC(3' stem) TTTTTTCATTCTTGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685