Motif View

Internal ID 17683011
Source Database TransTermHP TERM 395
Feature Type terminator
Name
Rho-independent transcription terminator TERM 395
Sequence GCCCCTGCCGTATCCGCGGCAGGGGC
Look for more occurrences
Start 1676775
End 1676800
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa B136-33, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCAGGCGAAGAAA(5' tail) GCCCCTGCCGT(5' stem) ATCC(loop) GCGGCAGGGGC(3' stem) TTTCTGCTTTCCGGC(3' tail). Confidence: 100. opp_overlap 1676775, overlap 1676771 1676768

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685