Motif View

Internal ID 17683786
Source Database TransTermHP TERM 36
Feature Type terminator
Name
Rho-independent transcription terminator TERM 36
Sequence CGCGGCGGCTCAGGCCGCCGCG
Look for more occurrences
Start 218676
End 218697
Strand +
Genomic Context Located within gene [M062_00960]
Replicon Pseudomonas aeruginosa RP73, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGGAAGGGAAAGCG(5' tail) CGCGGCGGC(5' stem) TCAG(loop) GCCGCCGCG(3' stem) TGTTGCGCCTGGTCC(3' tail). Confidence: 91. opp_overlap 218674 218673

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685