Motif View

Internal ID 17683840
Source Database TransTermHP TERM 120
Feature Type terminator
Name
Rho-independent transcription terminator TERM 120
Sequence CGGGCGGTAGGGCGAATAACCGCTTGCGGTTATCCGCCATTCCCCTGG
Look for more occurrences
Start 562911
End 562958
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa RP73, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTCCTCGCGCGGGA(5' tail) CGGGCGGTAGGGCGAATAACCG(5' stem) CTTG(loop) CGGTTATCCGCCATTCCCCTGG(3' stem) TTTTTCTCGTGCCGT(3' tail). Confidence: 100. overlap 562911 562953

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685