Motif View

Internal ID 17685495
Source Database TransTermHP TERM 110
Feature Type terminator
Name
Rho-independent transcription terminator TERM 110
Sequence ACCCCGCCAATTTGGCGGGGC
Look for more occurrences
Start 447962
End 447982
Strand -
Genomic Context
Replicon Pseudomonas sp. UW4 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTTCAGGCAAAAAAA(5' tail) GCCCCGCCA(5' stem) AAT(loop) TGGCGGGGT(3' stem) TGAGGTACGAGCGTG(3' tail). Confidence: 100. overlap 447963

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685