Motif View

Internal ID 17685664
Source Database TransTermHP TERM 337
Feature Type terminator
Name
Rho-independent transcription terminator TERM 337
Sequence ACGGGCCGACGTGGCCTGA
Look for more occurrences
Start 1381039
End 1381057
Strand +
Genomic Context
Replicon Pseudomonas sp. UW4 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAAGCGTCAGTTTGT(5' tail) ACGGGCCG(5' stem) ACG(loop) TGGCCTGA(3' stem) TTTTTTTGACTTCAT(3' tail). Confidence: 93. overlap 1381040

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685