| Internal ID | 17685666 | Source Database | TransTermHP TERM 339 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 339
|
| Sequence |
CCGGATAAACAAAAACCCGATCAGGTGACTGATCGGGTTTTTTGTTTTCGCGG Look for more occurrences |
| Start | 1383648 |
| End | 1383700 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. UW4 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CACTAAGCGCAAACA(5' tail) CCG-GATAAAC-AAAAACCCGATCAG(5' stem) GTGA(loop) CTGATCGGGTTTTTTGTTT-TCGCGG(3' stem) TTTATCAGGAGGCCA(3' tail). Confidence: 100. gap 3, opp_overlap 1383648 1383663, overlap 1383663 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|