| Internal ID | 17688453 | Source Database | TransTermHP TERM 1232 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1232
|
| Sequence |
GCCAGCTCCCACCTTTTGATGTGTGAACACAGTCAAGTGTGGGAGCTGGC Look for more occurrences |
| Start | 5350102 |
| End | 5350151 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas poae RE*1-1-14, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGCCATCGCAGGCAA(5' tail) GCCAGCTCCCACCTTTTGATGTG(5' stem) TGAA(loop) CACAGTCAAGTGTGGGAGCTGGC(3' stem) TTGCCTGCGATGAAG(3' tail). Confidence: 100. opp_overlap 5350060 5350102 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|