| Internal ID | 17688507 | Source Database | TransTermHP TERM 49 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 49
|
| Sequence |
GTTTTATCCACAAGGCCCGGCGCAATGCCGGGCCTTGTCGTTTCTGC Look for more occurrences |
| Start | 196573 |
| End | 196619 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas denitrificans ATCC 13867, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGCGAAAAACGAAAA(5' tail) GCAGAAACGACAAGGCCCGGCA(5' stem) TTG(loop) CGCCGGGCCTTGTGGATAAAAC(3' stem) GCCCCGGAGAGTGTG(3' tail). Confidence: 91. opp_overlap 196586, overlap 196567 196580 196583 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|