Motif View

Internal ID 17688657
Source Database TransTermHP TERM 264
Feature Type terminator
Name
Rho-independent transcription terminator TERM 264
Sequence GCGCGGCCCACGGGCCGCGC
Look for more occurrences
Start 875028
End 875047
Strand -
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCCAGGCAAAAAAA(5' tail) GCGCGGCC(5' stem) CGTG(loop) GGCCGCGC(3' stem) AAGGATCGATGTGAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685