Motif View

Internal ID 17689190
Source Database TransTermHP TERM 1075
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1075
Sequence GGGCGGACACCATCGGTGTCCGCCC
Look for more occurrences
Start 3565559
End 3565583
Strand +
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGAGCAAGGAAAAA(5' tail) GGGCGGACACC(5' stem) ATC(loop) GGTGTCCGCCC(3' stem) TTTTTTTGCATTTCC(3' tail). Confidence: 100. opp_overlap 3565559

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685