Motif View

Internal ID 17689507
Source Database TransTermHP TERM 1551
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1551
Sequence GCCCTGCCGGATGGCAGGGC
Look for more occurrences
Start 5037280
End 5037299
Strand +
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCTCGTACTCTCCA(5' tail) GCCCTGCC(5' stem) GGAT(loop) GGCAGGGC(3' stem) TTCTTTTTGCCCACC(3' tail). Confidence: 100. overlap 5037277 5037283

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685