Motif View

Internal ID 17689634
Source Database TransTermHP TERM 1741
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1741
Sequence GACGCGTGCCCGGCGTCCGCGCCGGGCACGCGCC
Look for more occurrences
Start 5525394
End 5525427
Strand -
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGCGCGGAATGCAA(5' tail) GGCGCGTGCCCGGCG(5' stem) CGGA(loop) CGCCGGGCACGCGTC(3' stem) AGGGAAGGATCAGCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685