Motif View

Internal ID 17689643
Source Database TransTermHP TERM 1751
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1751
Sequence CGGCCGGCGCACTCAGCGCCGGCCA
Look for more occurrences
Start 5566801
End 5566825
Strand +
Genomic Context Located within gene [H681_24810]
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CATCATTGAGCCCTC(5' tail) CGGCCGGCGC(5' stem) ACTCA(loop) GCGCCGGCCA(3' stem) TTTTCCTCCAGCAGA(3' tail). Confidence: 100. overlap 5566802

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685