Pseudomonas aeruginosa PAO1, PA0157 (triB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005215 transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Antibiotic resistance and susceptibility Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF111369 47 274 8.63E-24
Gene3D G3DSA:2.40.30.170 41 54 7.9E-68
Coils Coil 96 123 -
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 56 264 4.0E-17
Gene3D G3DSA:2.40.50.100 55 88 7.9E-68
TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit IPR006143 RND efflux pump, membrane fusion protein 32 351 5.1E-74
Gene3D G3DSA:2.40.420.20 34 40 7.9E-68
Gene3D G3DSA:2.40.420.20 278 349 7.9E-68
Gene3D G3DSA:2.40.50.100 163 201 7.9E-68
Coils Coil 141 161 -
Gene3D G3DSA:1.10.287.470 89 161 7.9E-68
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 5.0
Gene3D G3DSA:2.40.30.170 202 277 7.9E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.