Pseudomonas aeruginosa PAO1, PA0212 (mdcE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044248 cellular catabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0015976 carbon utilization
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0044262 cellular carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03134
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 268 6.8E-101
Gene3D G3DSA:3.90.226.10 13 242 6.0E-21
SUPERFAMILY SSF52096 IPR029045 ClpP/crotonase-like domain superfamily 26 244 1.74E-18
TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit 9 268 2.1E-99

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.