Pseudomonas aeruginosa PAO1, PA0288 (gpuA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0046872 | metal ion binding |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11358
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| PseudoCyc | ARGDEG-PWY | superpathway of L-arginine, putrescine, and 4-aminobutyrate degradation | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
| PseudoCyc | PWY-40 | putrescine biosynthesis I | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
| PseudoCyc | POLYAMSYN-PWY | superpathway of polyamine biosynthesis I | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
| MetaCyc | putrescine biosynthesis I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| PseudoCAP | Arginine and proline metabolism |
ECO:0000037
not_recorded |
|||
| MetaCyc | putrescine biosynthesis IV | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| PseudoCyc | PWY0-823 | L-arginine degradation III (arginine decarboxylase/agmatinase pathway) | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR01230 | JCVI: agmatinase | IPR005925 | Agmatinase-related | 39 | 308 | 5.5E-53 |
| PRINTS | PR00116 | Arginase signature | IPR006035 | Ureohydrolase | 235 | 264 | 5.9E-11 |
| CDD | cd11592 | Agmatinase_PAH | - | - | 19 | 307 | 0.0 |
| PIRSF | PIRSF036979 | Arginase | IPR006035 | Ureohydrolase | 14 | 314 | 4.4E-91 |
| PRINTS | PR00116 | Arginase signature | IPR006035 | Ureohydrolase | 122 | 137 | 5.9E-11 |
| Gene3D | G3DSA:3.40.800.10 | Ureohydrolase domain | - | - | 1 | 318 | 4.6E-114 |
| PANTHER | PTHR11358 | ARGINASE/AGMATINASE | IPR006035 | Ureohydrolase | 10 | 312 | 6.8E-81 |
| SUPERFAMILY | SSF52768 | Arginase/deacetylase | IPR023696 | Ureohydrolase domain superfamily | 15 | 311 | 1.1E-94 |
| Pfam | PF00491 | Arginase family | IPR006035 | Ureohydrolase | 36 | 307 | 8.9E-86 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.