Pseudomonas aeruginosa PAO1, PA0870 (phhC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCCGCCGCGG-N6-CCGCGGCGGC | 952582 | 952607 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 952523 | 952526 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Vfr binding site | 950691 | 950712 | - |
ECO:0000314
direct assay evidence used in manual assertion |
17159200 | Details |
| Inverted repeat: CGGCGGATAAC-N66-GTTATCCGCCG | 950796 | 950883 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTTATTCGCCCTAC-N20-GTAGGGCGAATAAC | 950816 | 950863 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 230 | 950924 | 950942 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 950657 | 950659 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |