Pseudomonas aeruginosa PAO1, PA1792

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016462 pyrophosphatase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01854
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009245 lipid A biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01854
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01854
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00149
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.60.21.10 - IPR029052 Metallo-dependent phosphatase-like 1 206 2.6E-16
FunFam G3DSA:3.60.21.10:FF:000012 UDP-2,3-diacylglucosamine hydrolase - - 1 167 1.4E-63
NCBIfam TIGR01854 JCVI: UDP-2,3-diacylglucosamine diphosphatase IPR010138 UDP-2,3-diacylglucosamine hydrolase 3 233 5.2E-114
SUPERFAMILY SSF56300 Metallo-dependent phosphatases IPR029052 Metallo-dependent phosphatase-like 1 224 5.43E-29
Pfam PF00149 Calcineurin-like phosphoesterase IPR004843 Calcineurin-like phosphoesterase domain, ApaH type 1 199 1.7E-8
Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. IPR010138 UDP-2,3-diacylglucosamine hydrolase 1 240 129.040039
PANTHER PTHR34990 UDP-2,3-DIACYLGLUCOSAMINE HYDROLASE-RELATED IPR043461 UDP-2,3-diacylglucosamine hydrolase LpxH-like 2 233 4.3E-65
CDD cd07398 MPP_YbbF-LpxH - - 4 219 4.81819E-62

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.