Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Coils | Coil | Coil | - | - | 68 | 88 | - |
FunFam | G3DSA:3.40.190.290:FF:000012 | Transcriptional regulator, LysR family | - | - | 91 | 296 | 2.7E-98 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 89 | 296 | 7.8E-54 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 21 | 32 | 5.6E-7 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 42 | 53 | 5.6E-7 |
CDD | cd08474 | PBP2_CrgA_like_5 | - | - | 92 | 293 | 4.32554E-104 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 90 | 294 | 1.6E-36 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 2 | 86 | 1.3E-23 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 2 | 87 | 4.0E-24 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 6 | 65 | 1.2E-20 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 32 | 42 | 5.6E-7 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 5 | 90 | 7.31E-22 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 91 | 296 | 6.52E-42 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 6 | 295 | 1.1E-81 |