Pseudomonas aeruginosa PAO1, PA2341

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03301
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03301
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008643 carbohydrate transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03301
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 238 4.0E-75
CDD cd03301 ABC_MalK_N IPR015855 ABC transporter, maltose/maltodextrin import, MalK-like 4 216 1.38695E-122
PANTHER PTHR43875 MALTODEXTRIN IMPORT ATP-BINDING PROTEIN MSMX IPR047641 ABC transporter, ATP-binding protein MalK/UgpC-like 1 361 0.0
Pfam PF08402 TOBE domain IPR013611 Transport-associated OB, type 2 281 355 4.8E-11
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 288 347 6.9E-25
Gene3D G3DSA:2.40.50.100 - - - 241 363 6.9E-25
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 4 240 4.62E-84
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 20 161 4.2E-32
FunFam G3DSA:3.40.50.300:FF:000042 Maltose/maltodextrin ABC transporter, ATP-binding protein - - 1 238 3.6E-112
SUPERFAMILY SSF50331 MOP-like IPR008995 Molybdate/tungstate binding, C-terminal 236 362 1.34E-27
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 28 211 1.2E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.