Pseudomonas aeruginosa PAO1, PA2939

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006508 proteolysis
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 11533066 Reviewed by curator
Biological Process GO:0043952 protein transport by the Sec complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 9642203 Reviewed by curator
Biological Process GO:0015628 protein secretion by the type II secretion system
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 9642203 Reviewed by curator
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12147
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008235 metalloexopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12147
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004177 aminopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03876
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Xcp type II secretion system ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03876 M28_SGAP_like IPR041756 Peptidase M28, SGAP-like 61 500 0.0
Pfam PF02225 PA domain IPR003137 PA domain 155 253 3.2E-17
SUPERFAMILY SSF53187 Zn-dependent exopeptidases - - 70 495 1.0E-62
Gene3D G3DSA:3.50.30.30 - - - 132 242 1.5E-8
PANTHER PTHR12147 METALLOPEPTIDASE M28 FAMILY MEMBER IPR045175 Peptidase M28 family 75 495 5.4E-61
CDD cd00538 PA - - 143 268 3.9702E-14
Gene3D G3DSA:3.40.630.10 Zn peptidases - - 61 131 6.3E-7
Gene3D G3DSA:3.40.630.10 Zn peptidases - - 243 499 2.2E-61
Pfam PF04389 Peptidase family M28 IPR007484 Peptidase M28 277 489 1.1E-45
SUPERFAMILY SSF52025 PA domain IPR046450 PA domain superfamily 117 239 3.79E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.