Pseudomonas aeruginosa PAO1, PA3537 (argF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006525 arginine metabolic process
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0006560 proline metabolic process
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0006520 cellular amino acid metabolic process
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Molecular Function GO:0004354 glutamate dehydrogenase (NADP+) activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0004585 ornithine carbamoyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006591 ornithine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016597 amino acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Urea cycle and metabolism of amino groups ECO:0000037
not_recorded
PseudoCyc ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCyc ARGDEGRAD-PWY L-arginine degradation V (arginine deiminase pathway) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc CITRULLINE-DEG-PWY L-citrulline degradation 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Arginine and proline metabolism ECO:0000037
not_recorded
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 120 134 5.3E-29
PANTHER PTHR45753 ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL - - 3 300 1.5E-106
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 80 93 5.3E-29
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 131 142 5.2E-27
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 49 68 5.2E-27
Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding 4 144 3.6E-45
NCBIfam TIGR00658 JCVI: ornithine carbamoyltransferase IPR002292 Ornithine/putrescine carbamoyltransferase 4 299 1.3E-115
FunFam G3DSA:3.40.50.1370:FF:000024 Ornithine carbamoyltransferase - - 4 133 5.2E-67
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 252 261 5.2E-27
Gene3D G3DSA:3.40.50.1370 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 4 133 1.2E-117
Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. IPR024904 Ornithine carbamoyltransferase 3 300 79.575317
FunFam G3DSA:3.40.50.1370:FF:000008 Ornithine carbamoyltransferase - - 134 286 4.4E-60
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 216 226 5.3E-29
SUPERFAMILY SSF53671 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 2 300 1.07E-103
Gene3D G3DSA:3.40.50.1370 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 134 295 1.2E-117
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 264 287 5.2E-27
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 278 289 5.3E-29
Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain 150 297 1.2E-49
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 47 61 5.3E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.