Pseudomonas aeruginosa PAO1, PA3555 (arnD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:1901760	beta-L-Ara4N-lipid A biosynthetic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	15695810	Reviewed by curator
Molecular Function	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01870	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0005975	carbohydrate metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01522	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01522	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Antibiotic resistance and susceptibility Other PAO1 genes in this class Cell wall / LPS / capsule Other PAO1 genes in this class Adaptation, Protection Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae01503	Cationic antimicrobial peptide (CAMP) resistance	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae00520	Amino sugar and nucleotide sugar metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF01522	Polysaccharide deacetylase	IPR002509	NodB homology domain	15	170	2.9E-13
Hamap	MF_01870	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD].	IPR023557	4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable	1	295	65.719795
Gene3D	G3DSA:3.20.20.370	Glycoside hydrolase/deacetylase	-	-	4	266	1.7E-26
SUPERFAMILY	SSF88713	Glycoside hydrolase/deacetylase	IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel	14	266	2.78E-30
PANTHER	PTHR10587	GLYCOSYL TRANSFERASE-RELATED	-	-	4	268	3.4E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.