Pseudomonas aeruginosa PAO1, PA3607 (potA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015847 putrescine transport
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 8416922 Reviewed by curator
Biological Process GO:0006810 transport
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015417 ATPase-coupled polyamine transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01187
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015846 polyamine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01187
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 21 163 8.4E-37
Gene3D G3DSA:2.40.50.100 - - - 220 311 2.7E-13
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 5 243 4.83E-88
Pfam PF08402 TOBE domain IPR013611 Transport-associated OB, type 2 280 360 3.7E-16
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 219 2.8E-71
FunFam G3DSA:3.40.50.300:FF:000133 Spermidine/putrescine import ATP-binding protein PotA - - 3 223 6.9E-101
NCBIfam TIGR01187 JCVI: polyamine ABC transporter ATP-binding protein IPR005893 Spermidine/putrescine import ATP-binding protein PotA-like 36 356 6.8E-117
SUPERFAMILY SSF50331 MOP-like IPR008995 Molybdate/tungstate binding, C-terminal 239 360 1.87E-17
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 30 213 6.2E-18
PANTHER PTHR42781 SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTA - - 3 360 5.2E-118

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.