Operon name:
fptA-PA4220
(2
gene members)
Evidence
Computationally-predicted.
References
DOOR: a database for prokaryotic operons.
Mao F, Dam P, Chou J, Olman V, Xu Y
Nucleic Acids Res. 2009 Jan;37(Database issue):D459-63
PubMed ID: 18988623
Cross-References
DOOR:
13965
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Operon name:
fptA
(1
gene members)
Evidence
A transcription unit is inferred from author statement. In this case, there is often a set of adjacent genes, encoded in the same direction, coding for products that participate in the same metabolic pathway or biological process.
References
PchR-box recognition by the AraC-type regulator PchR of Pseudomonas aeruginosa requires the siderophore pyochelin as an effector.
Michel L, González N, Jagdeep S, Nguyen-Ngoc T, Reimmann C
Mol. Microbiol. 2005 Oct;58(2):495-509
PubMed ID: 16194235
Cross-References
PseudoCAP:
41734
|
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Operon name:
fptABCX
(4
gene members)
Experiment
Attributes
method:
RT-PCR
Evidence
Transcription unit experimentally validated in a strain of the same species. The start coordinate will often be based on an experimentally validated transcription start site. For protein-coding genes, unless otherwise specified, the stop will be based on the stop codon.
References
Ferripyochelin uptake genes are involved in pyochelin-mediated signalling in Pseudomonas aeruginosa.
Michel L, Bachelard A, Reimmann C
Microbiology (Reading, Engl.) 2007 May;153(Pt 5):1508-18
PubMed ID: 17464065
Cross-References
PseudoCAP:
41733
|