Pseudomonas aeruginosa PAO1, PA4276 (secE)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0015031	protein transport	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	2673920	Reviewed by curator
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01650	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00584	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006605	protein targeting	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00584	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008320	protein transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01650	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006886	intracellular protein transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00584	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03060	Protein export	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae02024	Quorum sensing	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.20.5.1030	Preprotein translocase secy subunit	IPR038379	SecE superfamily	63	120	2.8E-17
Hamap	MF_00422	Protein translocase subunit SecE [secE].	IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	61	120	13.247345
PRINTS	PR01650	Bacterial translocase SecE signature	IPR005807	SecE subunit of protein translocation complex, bacterial-like	87	107	9.4E-27
Pfam	PF00584	SecE/Sec61-gamma subunits of protein translocation complex	IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	70	121	4.3E-20
PRINTS	PR01650	Bacterial translocase SecE signature	IPR005807	SecE subunit of protein translocation complex, bacterial-like	63	83	9.4E-27
PANTHER	PTHR33910	PROTEIN TRANSLOCASE SUBUNIT SECE	IPR005807	SecE subunit of protein translocation complex, bacterial-like	22	122	6.5E-27
NCBIfam	TIGR00964	JCVI: preprotein translocase subunit SecE	IPR005807	SecE subunit of protein translocation complex, bacterial-like	66	122	7.1E-20
PRINTS	PR01650	Bacterial translocase SecE signature	IPR005807	SecE subunit of protein translocation complex, bacterial-like	42	63	9.4E-27
PRINTS	PR01650	Bacterial translocase SecE signature	IPR005807	SecE subunit of protein translocation complex, bacterial-like	107	122	9.4E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.