Pseudomonas aeruginosa PAO1, PA4468 (sodM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Operons

Operon name: PA4471-fumC1-PA4469-sodM-PA4467 (5 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA4467 hypothetical protein 4996488 4997420 - CDS
Gene Details
PA4468 sodM superoxide dismutase 4997439 4998050 - CDS
Gene Details
PA4469 hypothetical protein 4998063 4998512 - CDS
Gene Details
PA4470 fumC1 fumarate hydratase 4998540 4999916 - CDS
Gene Details
PA4471 hypothetical protein 4999909 5000304 - CDS
Gene Details
Evidence
Computationally-predicted.
References
DOOR: a database for prokaryotic operons.
Mao F, Dam P, Chou J, Olman V, Xu Y
Nucleic Acids Res. 2009 Jan;37(Database issue):D459-63
PubMed ID: 18988623
Cross-References
DOOR: 14017
Operon name: fumC1-sodM (3 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA4470 fumC1 fumarate hydratase 4998540 4999916 - CDS
Gene Details
PA4469 hypothetical protein 4998063 4998512 - CDS
Gene Details
PA4468 sodM superoxide dismutase 4997439 4998050 - CDS
Gene Details
Evidence
Transcription unit experimentally validated in a strain of the same species. The start coordinate will often be based on an experimentally validated transcription start site. For protein-coding genes, unless otherwise specified, the stop will be based on the stop codon.
References
The Pseudomonas aeruginosa fumc and soda genes belong to an iron-responsive operon.
Polack B, Dacheux D, Delic-Attree I, Toussaint B, Vignais PM
Biochem. Biophys. Res. Commun. 1996 Sep;226(2):555-60
PubMed ID: 8806672
Cross-References
PseudoCAP: 41715