Pseudomonas aeruginosa PAO1, PA4484 (gatB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0030956 | glutamyl-tRNA(Gln) amidotransferase complex | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
9342321 | Reviewed by curator |
| Molecular Function | GO:0050567 | glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
9342321 | Reviewed by curator |
| Molecular Function | GO:0016874 | ligase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02934
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00121
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF55931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pae01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pae00970 | Aminoacyl-tRNA biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:1.10.150.380:FF:000001 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | - | - | 296 | 351 | 7.8E-25 |
| NCBIfam | TIGR00133 | JCVI: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB | IPR004413 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | 2 | 479 | 0.0 |
| SMART | SM00845 | gatb_yqey_2 | IPR018027 | Asn/Gln amidotransferase | 328 | 479 | 2.2E-78 |
| SUPERFAMILY | SSF89095 | GatB/YqeY motif | IPR003789 | Aspartyl/glutamyl-tRNA amidotransferase subunit B-like | 297 | 402 | 5.1E-35 |
| Gene3D | G3DSA:1.10.10.410 | - | IPR023168 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 | 415 | 481 | 1.2E-24 |
| Hamap | MF_00121 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. | IPR004413 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | 2 | 480 | 38.668255 |
| Pfam | PF02637 | GatB domain | IPR018027 | Asn/Gln amidotransferase | 328 | 479 | 4.8E-52 |
| FunFam | G3DSA:1.10.10.410:FF:000001 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | - | - | 415 | 480 | 9.9E-27 |
| Gene3D | G3DSA:1.10.150.380 | - | IPR042114 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 | 296 | 352 | 1.7E-12 |
| PANTHER | PTHR11659 | GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED | IPR017959 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E | 2 | 480 | 0.0 |
| Pfam | PF02934 | GatB/GatE catalytic domain | IPR006075 | Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic | 5 | 288 | 3.0E-110 |
| SUPERFAMILY | SSF55931 | Glutamine synthetase/guanido kinase | IPR014746 | Glutamine synthetase/guanido kinase, catalytic domain | 4 | 296 | 4.12E-120 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.