Pseudomonas aeruginosa PAO1, PA5094

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0031460 glycine betaine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43869 GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM ATP-BINDING PROTEIN PROV - - 6 271 0.0
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 49 196 5.6E-32
FunFam G3DSA:3.40.50.300:FF:000201 Glycine betaine/L-proline ABC transporter ATP-binding protein - - 36 275 5.1E-112
NCBIfam TIGR01186 JCVI: betaine/proline/choline family ABC transporter ATP-binding protein IPR005892 Glycine betaine/proline betaine transport system ATP-binding protein ProV-like 41 271 8.6E-109
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 47 270 1.72E-73
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 57 245 3.8E-18
CDD cd03294 ABC_Pro_Gly_Betaine - - 9 270 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 39 275 9.7E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.