Pseudomonas aeruginosa PAO1, PA5172 (arcB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019546 arginine deiminase pathway
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 6438064 Reviewed by curator
Molecular Function GO:0004585 ornithine carbamoyltransferase activity
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 6438064 Reviewed by curator
Molecular Function GO:0004585 ornithine carbamoyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.1370
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016597 amino acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.1370
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00658
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006591 ornithine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Arginine and proline metabolism ECO:0000037
not_recorded
KEGG pae01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Urea cycle and metabolism of amino groups ECO:0000037
not_recorded
KEGG pae00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 312 323 1.0E-30
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 298 321 3.2E-25
Gene3D G3DSA:3.40.50.1370 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 152 320 0.0
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 124 138 1.0E-30
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 267 276 3.2E-25
Gene3D G3DSA:3.40.50.1370 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 5 333 0.0
Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. IPR024904 Ornithine carbamoyltransferase 7 334 81.382256
Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain 156 331 6.7E-55
PANTHER PTHR45753 ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL - - 3 333 2.8E-101
FunFam G3DSA:3.40.50.1370:FF:000003 Ornithine carbamoyltransferase - - 5 162 8.9E-83
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 135 146 3.2E-25
SUPERFAMILY SSF53671 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 4 334 5.76E-100
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 51 65 1.0E-30
NCBIfam TIGR00658 JCVI: ornithine carbamoyltransferase IPR002292 Ornithine/putrescine carbamoyltransferase 8 333 0.0
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 53 72 3.2E-25
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 84 97 1.0E-30
Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding 8 148 1.0E-45
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 229 239 1.0E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.