Pseudomonas aeruginosa PAO1, PA5338 (spoT)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 6005889 | 6005892 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGGACCAGGT-N2-ACCTGGTCCG | 6006280 | 6006301 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CTCGGCGAGC-N73-GCTCGCCGAG | 6007683 | 6007775 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGACGGGGCC-N3-GGCCCCGTCGC | 6008790 | 6008814 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |