Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5505
|
Name |
|
Replicon | chromosome |
Genomic location | 6197070 - 6197852 (+ strand) |
Transposon Mutants | 6 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_254192.1 |
GI | 15600698 |
Affymetrix | PA5505_at |
DNASU | PaCD00008373 |
Entrez | 878152 |
GenBank | AAG08890.1 |
INSDC | AAG08890.1 |
NCBI Locus Tag | PA5505 |
protein_id(GenBank) | gb|AAG08890.1|AE004963_3|gnl|PseudoCAP|PA5505 |
TIGR | NTL03PA05506 |
UniParc | UPI00000C6040 |
UniProtKB Acc | Q9HT68 |
UniProtKB ID | Q9HT68_PSEAE |
UniRef100 | UniRef100_Q9HT68 |
UniRef50 | UniRef50_C6WJH9 |
UniRef90 | UniRef90_Q9HT68 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable TonB-dependent receptor
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by iTRAQ (PMID:21863142).
|
Charge (pH 7) | 1.96 |
Kyte-Doolittle Hydrophobicity Value | -0.101 |
Molecular Weight (kDa) | 28.1 |
Isoelectric Point (pI) | 8.69 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4K3F | TRANSPORT PROTEIN | 04/10/13 | Crystal structure of a putative TonB-dependent receptor (PA5505) from Pseudomonas aeruginosa PAO1 at 1.60 A resolution | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 268 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005044 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5505
Search term: probable TonB-dependent receptor
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|