Pseudomonas aeruginosa UCBPP-PA14, PA14_04310 (rpiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004751 ribose-5-phosphate isomerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00170
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009052 pentose-phosphate shunt, non-oxidative branch
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00170
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00030 Pentose phosphate pathway 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF100950 NagB/RpiA/CoA transferase-like IPR037171 NagB/RpiA transferase-like 1 150 2.7E-42
CDD cd01398 RPI_A IPR004788 Ribose 5-phosphate isomerase, type A 6 214 2.00316E-97
Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IPR004788 Ribose 5-phosphate isomerase, type A 53 217 5.0E-57
SUPERFAMILY SSF75445 D-ribose-5-phosphate isomerase (RpiA), lid domain - - 131 202 7.98E-24
Gene3D G3DSA:3.30.70.260 - - - 129 200 8.7E-82
PANTHER PTHR11934 RIBOSE-5-PHOSPHATE ISOMERASE IPR004788 Ribose 5-phosphate isomerase, type A 2 221 1.3E-63
NCBIfam TIGR00021 JCVI: ribose 5-phosphate isomerase A IPR004788 Ribose 5-phosphate isomerase, type A 7 219 2.8E-64
Gene3D G3DSA:3.40.50.1360 - - - 6 211 8.7E-82
Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. IPR020672 Ribose-5-phosphate isomerase, type A, subgroup 3 221 33.60857
FunFam G3DSA:3.40.50.1360:FF:000001 Ribose-5-phosphate isomerase A - - 6 141 2.1E-45
FunFam G3DSA:3.30.70.260:FF:000004 Ribose-5-phosphate isomerase A - - 129 200 2.3E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.