Pseudomonas aeruginosa UCBPP-PA14, PA14_06710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13404
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class
Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class
Energy metabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 1 53 2.1E-8
SMART SM00344 asnc IPR019888 Transcription regulator AsnC-like 1 108 0.0059
Coils Coil Coil - - 77 97 -
Gene3D G3DSA:3.30.70.3460 - - - 64 145 1.7E-21
Pfam PF17805 AsnC-like ligand binding domain IPR040523 Siroheme decarboxylase , AsnC-like ligand binding domain 64 130 1.1E-18
PANTHER PTHR43413 TRANSCRIPTIONAL REGULATOR, ASNC FAMILY - - 1 123 6.0E-28
Pfam PF13404 AsnC-type helix-turn-helix domain IPR000485 AsnC-type HTH domain 1 45 3.5E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.