Pseudomonas aeruginosa UCBPP-PA14, PA14_43020 (hsiF2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0033103 | protein secretion by the type VI secretion system |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1659
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
18524912 |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR03357 | JCVI: type VI secretion system baseplate subunit TssE | IPR017737 | Type VI secretion system protein TssE1-like | 5 | 134 | 5.3E-38 |
| FunFam | G3DSA:3.10.450.40:FF:000023 | Type VI secretion system protein | - | - | 8 | 129 | 2.9E-79 |
| SUPERFAMILY | SSF160719 | gpW/gp25-like | - | - | 24 | 128 | 1.96E-19 |
| PANTHER | PTHR38595 | CYTOPLASMIC PROTEIN-RELATED | - | - | 28 | 134 | 4.0E-13 |
| Gene3D | G3DSA:3.10.450.40 | - | - | - | 8 | 128 | 3.8E-10 |
| Pfam | PF04965 | Baseplate wedge protein gp25 | IPR007048 | IraD/Gp25-like | 26 | 113 | 4.0E-16 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.