Pseudomonas aeruginosa UCBPP-PA14, PA14_46060 (gbuR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1900081 regulation of arginine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1422
 ECO:0000249
sequence similarity evidence used in automatic assertion		 12029055
Biological Process GO:0051345 positive regulation of hydrolase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1422
 ECO:0000249
sequence similarity evidence used in automatic assertion		 12029055
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 8 67 2.2E-16
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 4 83 1.38E-17
PANTHER PTHR30126 HTH-TYPE TRANSCRIPTIONAL REGULATOR - - 7 294 1.8E-56
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 3 83 4.0E-18
FunFam G3DSA:1.10.10.10:FF:000511 LysR family transcriptional regulator - - 6 93 2.2E-42
FunFam G3DSA:3.40.190.10:FF:000390 LysR family transcriptional regulator - - 172 268 7.8E-67
Gene3D G3DSA:3.40.190.10 - - - 96 284 2.7E-20
Gene3D G3DSA:3.40.190.10 - - - 172 268 2.7E-20
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 92 294 4.4E-38
CDD cd05466 PBP2_LTTR_substrate - - 97 290 2.30421E-22
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 93 294 4.5E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.