Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 14 | 72 | 4.7E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 40 | 50 | 1.5E-6 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 29 | 40 | 1.5E-6 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 101 | 291 | 6.52E-27 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 6 | 119 | 1.74E-23 |
PANTHER | PTHR30579 | TRANSCRIPTIONAL REGULATOR | - | - | 11 | 294 | 6.1E-81 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 101 | 287 | 3.7E-27 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 9 | 94 | 4.8E-25 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 50 | 61 | 1.5E-6 |
FunFam | G3DSA:3.40.190.10:FF:000069 | HTH-type transcriptional regulator lrhA | - | - | 170 | 263 | 7.8E-35 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 170 | 263 | 6.8E-46 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 12 | 95 | 5.9E-23 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 104 | 270 | 6.8E-46 |