Pseudomonas aeruginosa UCBPP-PA14, PA14_33940 (tseF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_33940
Name
tseF
Replicon chromosome
Genomic location 3017037 - 3017573 (- strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_790868.1
GI 116050315
Entrez 4380436
INSDC ABJ11551.1
NCBI Locus Tag PA14_33940
UniParc UPI0000396AC6
UniProtKB Acc Q02MG8
UniProtKB ID Q02MG8_PSEAB
UniRef100 UniRef100_Q02MG8
UniRef50 UniRef50_A0A0A1I354
UniRef90 UniRef90_W0YR06

Product

Feature Type CDS
Coding Frame 1
Product Name
TseF
Product Name Confidence: Class 1
CommentHcp Secretion Island-III-encoded type VI secretion system (H3-T6SS)
Evidence for Translation
Charge (pH 7) 1.39
Kyte-Doolittle Hydrophobicity Value -0.681
Molecular Weight (kDa) 19.8
Isoelectric Point (pI) 7.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Virulence Evidence

Source 1
Database PseudoCAP
Category Hcp secretion island-3 encoded type VI secretion system (H3-T6SS)
Evidence ECO:0000316
genetic interaction evidence used in manual assertion
Host Organism Arabidopsis thaliana
Notes
Infection model Arabidopsis leaf infiltration model
Reference 19497948

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 66 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003152 (337 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_33940
Search term: tseF
Search term: TseF

References

PubMed ID: 28348410